Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc4Q99J62 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc4Q99J62 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rfc4Q99J62 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Gm8738-201ENSMUST00000172606 329 ntBASIC15.19■□□□□ 0.02
Rfc4Q99J62 Gm37042-201ENSMUST00000193816 581 ntBASIC15.19■□□□□ 0.02
Rfc4Q99J62 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rfc4Q99J62 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Gm14726-201ENSMUST00000120623 896 ntBASIC15.18■□□□□ 0.02
Rfc4Q99J62 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.18■□□□□ 0.02
Rfc4Q99J62 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.18■□□□□ 0.02
Rfc4Q99J62 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.18■□□□□ 0.02
Rfc4Q99J62 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.18■□□□□ 0.02
Rfc4Q99J62 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.18■□□□□ 0.02
Rfc4Q99J62 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc4Q99J62 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.17■□□□□ 0.02
Rfc4Q99J62 Gm17208-201ENSMUST00000168388 535 ntBASIC15.17■□□□□ 0.02
Rfc4Q99J62 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Gm16505-201ENSMUST00000179981 232 ntBASIC15.17■□□□□ 0.02
Rfc4Q99J62 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Rps4l-202ENSMUST00000204242 789 ntBASIC15.17■□□□□ 0.02
Rfc4Q99J62 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms