Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC20.54■□□□□ 0.88
Clip1Q922J3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
Clip1Q922J3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC20.54■□□□□ 0.88
Clip1Q922J3 Gm12012-201ENSMUST00000118857 1066 ntBASIC20.54■□□□□ 0.88
Clip1Q922J3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC20.54■□□□□ 0.88
Clip1Q922J3 Gm45186-201ENSMUST00000206874 478 ntBASIC20.54■□□□□ 0.88
Clip1Q922J3 Gm19963-201ENSMUST00000208413 1255 ntBASIC20.54■□□□□ 0.88
Clip1Q922J3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clip1Q922J3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC20.54■□□□□ 0.88
Clip1Q922J3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Clip1Q922J3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC20.53■□□□□ 0.88
Clip1Q922J3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Gm23270-201ENSMUST00000104055 131 ntBASIC20.53■□□□□ 0.88
Clip1Q922J3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC20.53■□□□□ 0.88
Clip1Q922J3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC20.53■□□□□ 0.88
Clip1Q922J3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Clip1Q922J3 Gm31256-201ENSMUST00000194705 506 ntBASIC20.53■□□□□ 0.88
Clip1Q922J3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC20.53■□□□□ 0.88
Clip1Q922J3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC20.53■□□□□ 0.88
Clip1Q922J3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Mettl6-204ENSMUST00000227595 1027 ntBASIC20.53■□□□□ 0.88
Clip1Q922J3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Clip1Q922J3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clip1Q922J3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC20.52■□□□□ 0.88
Clip1Q922J3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm11405-201ENSMUST00000118689 1556 ntBASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm8862-201ENSMUST00000198379 1346 ntBASIC20.52■□□□□ 0.88
Clip1Q922J3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm8908-201ENSMUST00000121633 1024 ntBASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC20.52■□□□□ 0.88
Clip1Q922J3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm38317-201ENSMUST00000195564 343 ntBASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm18615-201ENSMUST00000222919 1031 ntBASIC20.52■□□□□ 0.88
Clip1Q922J3 AC154595.3-201ENSMUST00000224579 384 ntBASIC20.52■□□□□ 0.88
Clip1Q922J3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Daam2-202ENSMUST00000224595 1926 ntBASIC20.52■□□□□ 0.88
Clip1Q922J3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Clip1Q922J3 Gm42769-201ENSMUST00000198576 1659 ntBASIC20.52■□□□□ 0.88
Clip1Q922J3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clip1Q922J3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clip1Q922J3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC20.52■□□□□ 0.87
Clip1Q922J3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clip1Q922J3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clip1Q922J3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clip1Q922J3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Clip1Q922J3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clip1Q922J3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clip1Q922J3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip1Q922J3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC20.51■□□□□ 0.87
Clip1Q922J3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Clip1Q922J3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Clip1Q922J3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clip1Q922J3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip1Q922J3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip1Q922J3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC20.51■□□□□ 0.87
Clip1Q922J3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clip1Q922J3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clip1Q922J3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Clip1Q922J3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms