Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Gm27701-201ENSMUST00000184498 110 ntBASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Gm2495-201ENSMUST00000191160 466 ntBASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb1Q91Y08 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Gm11424-201ENSMUST00000121929 829 ntBASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Gm43438-201ENSMUST00000198133 379 ntBASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Gm18473-201ENSMUST00000220543 868 ntBASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms