Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Gm22189-201ENSMUST00000103822 86 ntBASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Gm7730-201ENSMUST00000212486 454 ntBASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga3Q91XY5 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga3Q91XY5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Mir6977-201ENSMUST00000184960 64 ntBASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms