Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm12138-201ENSMUST00000122180 951 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm15376-201ENSMUST00000122258 783 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Mir1894-201ENSMUST00000122802 81 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm42550-201ENSMUST00000201553 960 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga4Q91XY4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Gm27892-201ENSMUST00000185017 106 ntBASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Gm43433-201ENSMUST00000196573 481 ntBASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms