Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Gm12742-201ENSMUST00000117326 410 ntBASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Mir1938-201ENSMUST00000158746 100 ntBASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx41Q91VN6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Gm27731-201ENSMUST00000185192 107 ntBASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.18■□□□□ 0.02
Ddx41Q91VN6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Gm17330-201ENSMUST00000221047 165 ntBASIC15.18■□□□□ 0.02
Ddx41Q91VN6 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.18■□□□□ 0.02
Ddx41Q91VN6 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx41Q91VN6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Gm44487-201ENSMUST00000205145 325 ntBASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Gm45841-201ENSMUST00000207700 164 ntBASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Gm8598-201ENSMUST00000221184 836 ntBASIC15.17■□□□□ 0.02
Ddx41Q91VN6 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms