Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.37□□□□□ -0.59
Tram1Q91V04 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.37□□□□□ -0.59
Tram1Q91V04 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Tram1Q91V04 Gm13385-201ENSMUST00000121089 220 ntBASIC11.37□□□□□ -0.59
Tram1Q91V04 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.37□□□□□ -0.59
Tram1Q91V04 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.37□□□□□ -0.59
Tram1Q91V04 Gm4804-201ENSMUST00000182234 999 ntBASIC11.37□□□□□ -0.59
Tram1Q91V04 Gm20553-201ENSMUST00000204205 844 ntBASIC11.37□□□□□ -0.59
Tram1Q91V04 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.37□□□□□ -0.59
Tram1Q91V04 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Tram1Q91V04 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.37□□□□□ -0.59
Tram1Q91V04 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.37□□□□□ -0.59
Tram1Q91V04 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tram1Q91V04 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.36□□□□□ -0.59
Tram1Q91V04 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Gm5566-201ENSMUST00000116118 459 ntBASIC11.36□□□□□ -0.59
Tram1Q91V04 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Gm17271-201ENSMUST00000165535 355 ntBASIC11.36□□□□□ -0.59
Tram1Q91V04 Gm21470-201ENSMUST00000187680 696 ntBASIC11.36□□□□□ -0.59
Tram1Q91V04 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.36□□□□□ -0.59
Tram1Q91V04 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Gm6916-202ENSMUST00000205523 195 ntBASIC11.36□□□□□ -0.59
Tram1Q91V04 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.36□□□□□ -0.59
Tram1Q91V04 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Tram1Q91V04 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tram1Q91V04 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.35□□□□□ -0.59
Tram1Q91V04 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Tram1Q91V04 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Tram1Q91V04 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.35□□□□□ -0.59
Tram1Q91V04 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.35□□□□□ -0.59
Tram1Q91V04 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.35□□□□□ -0.59
Tram1Q91V04 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Tram1Q91V04 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Tram1Q91V04 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Tram1Q91V04 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tram1Q91V04 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms