Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Gm12585-201ENSMUST00000117307 290 ntBASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Gm28630-201ENSMUST00000187806 498 ntBASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Nup35Q8R4R6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup35Q8R4R6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Nup35Q8R4R6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup35Q8R4R6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup35Q8R4R6 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.77□□□□□ -0.68
Nup35Q8R4R6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup35Q8R4R6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup35Q8R4R6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Gm24158-201ENSMUST00000175263 71 ntBASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Gm46209-201ENSMUST00000217912 553 ntBASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Gm17330-201ENSMUST00000221047 165 ntBASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup35Q8R4R6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms