Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim29Q8R2Q0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim29Q8R2Q0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim29Q8R2Q0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim29Q8R2Q0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim29Q8R2Q0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.12■□□□□ 0.01
Trim29Q8R2Q0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim29Q8R2Q0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Gm44397-201ENSMUST00000195950 113 ntBASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim29Q8R2Q0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim29Q8R2Q0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Gm15429-201ENSMUST00000151268 798 ntBASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim29Q8R2Q0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms