Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Clrn1Q8K445 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.48□□□□□ -0.41
Clrn1Q8K445 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.48□□□□□ -0.41
Clrn1Q8K445 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.48□□□□□ -0.41
Clrn1Q8K445 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Gm27701-201ENSMUST00000184498 110 ntBASIC12.48□□□□□ -0.41
Clrn1Q8K445 Gm28911-201ENSMUST00000188837 117 ntBASIC12.48□□□□□ -0.41
Clrn1Q8K445 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.48□□□□□ -0.41
Clrn1Q8K445 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn1Q8K445 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Gm11918-201ENSMUST00000121660 179 ntBASIC12.47□□□□□ -0.41
Clrn1Q8K445 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.47□□□□□ -0.41
Clrn1Q8K445 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Gm45841-201ENSMUST00000207700 164 ntBASIC12.47□□□□□ -0.41
Clrn1Q8K445 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Clrn1Q8K445 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms