Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Gm38223-201ENSMUST00000194484 695 ntBASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Gm19220-201ENSMUST00000222682 803 ntBASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cchcr1Q8K2I2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Cchcr1Q8K2I2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Cchcr1Q8K2I2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.64■□□□□ 0.1
Cchcr1Q8K2I2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cchcr1Q8K2I2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Gm15371-201ENSMUST00000117057 784 ntBASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms