Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Grk6-205ENSMUST00000224653 2976 ntBASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Gm12138-201ENSMUST00000122180 951 ntBASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Gm8463-201ENSMUST00000208573 613 ntBASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfwd3Q8CIK8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Gm5745-201ENSMUST00000183748 313 ntBASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Gm29608-201ENSMUST00000190444 463 ntBASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfwd3Q8CIK8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms