Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.07■□□□□ 0.32
Rab11fip3Q8CHD8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Gm13786-201ENSMUST00000122371 333 ntBASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Gm7809-201ENSMUST00000153199 742 ntBASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Gm24548-201ENSMUST00000158650 108 ntBASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Olfr582-201ENSMUST00000098212 960 ntBASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip3Q8CHD8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Gm3890-201ENSMUST00000182416 207 ntBASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Gm29396-201ENSMUST00000185659 716 ntBASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab11fip3Q8CHD8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Gm8099-201ENSMUST00000200510 742 ntBASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Olfr284-202ENSMUST00000206647 966 ntBASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab11fip3Q8CHD8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms