Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.17■□□□□ 0.02
Smc2Q8CG48 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.17■□□□□ 0.02
Smc2Q8CG48 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.17■□□□□ 0.02
Smc2Q8CG48 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.17■□□□□ 0.02
Smc2Q8CG48 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Smc2Q8CG48 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smc2Q8CG48 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.16■□□□□ 0.02
Smc2Q8CG48 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc2Q8CG48 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.15■□□□□ 0.02
Smc2Q8CG48 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.15■□□□□ 0.02
Smc2Q8CG48 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.15■□□□□ 0.02
Smc2Q8CG48 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Gm28631-201ENSMUST00000190740 334 ntBASIC15.15■□□□□ 0.02
Smc2Q8CG48 Gm44855-201ENSMUST00000205725 362 ntBASIC15.15■□□□□ 0.02
Smc2Q8CG48 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Gm6218-201ENSMUST00000219812 628 ntBASIC15.15■□□□□ 0.02
Smc2Q8CG48 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.15■□□□□ 0.02
Smc2Q8CG48 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc2Q8CG48 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc2Q8CG48 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Smc2Q8CG48 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc2Q8CG48 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc2Q8CG48 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc2Q8CG48 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc2Q8CG48 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc2Q8CG48 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc2Q8CG48 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smc2Q8CG48 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc2Q8CG48 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc2Q8CG48 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms