Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm6912-201ENSMUST00000117218 544 ntBASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm24420-201ENSMUST00000176676 59 ntBASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm9063-201ENSMUST00000223299 582 ntBASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps9d1Q8C190 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vps9d1Q8C190 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vps9d1Q8C190 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vps9d1Q8C190 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.4□□□□□ -0.43
Vps9d1Q8C190 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Mir874-201ENSMUST00000104769 76 ntBASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Gm10766-202ENSMUST00000194123 606 ntBASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps9d1Q8C190 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms