Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf3Q8C120 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Gm45841-201ENSMUST00000207700 164 ntBASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Gm6180-201ENSMUST00000065243 498 ntBASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf3Q8C120 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sh3rf3Q8C120 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sh3rf3Q8C120 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Gm12091-201ENSMUST00000146791 830 ntBASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Gm15429-201ENSMUST00000151268 798 ntBASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf3Q8C120 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms