Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Gm6745-201ENSMUST00000199216 526 ntBASIC13.4□□□□□ -0.26
Usp43Q8BUM9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp43Q8BUM9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Usp43Q8BUM9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp43Q8BUM9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Gm11918-201ENSMUST00000121660 179 ntBASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Gm11978-201ENSMUST00000122315 466 ntBASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.38□□□□□ -0.27
Usp43Q8BUM9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.38□□□□□ -0.27
Usp43Q8BUM9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp43Q8BUM9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms