Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Mir1982-201ENSMUST00000157368 74 ntBASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Gm43818-201ENSMUST00000200605 466 ntBASIC13.53□□□□□ -0.24
Nup54Q8BTS4 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nup54Q8BTS4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.53□□□□□ -0.24
Nup54Q8BTS4 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup54Q8BTS4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.52□□□□□ -0.24
Nup54Q8BTS4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Gm13226-201ENSMUST00000117838 404 ntBASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Gm19931-201ENSMUST00000198920 368 ntBASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Nup54Q8BTS4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gm27731-201ENSMUST00000185192 107 ntBASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gm28693-202ENSMUST00000190758 331 ntBASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gm18062-201ENSMUST00000208020 547 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms