Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Mir874-201ENSMUST00000104769 76 ntBASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cpne3Q8BT60 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Gm15487-201ENSMUST00000122373 465 ntBASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Gm27306-201ENSMUST00000183970 107 ntBASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpne3Q8BT60 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms