Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Gm45598-202ENSMUST00000210719 986 ntBASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Gm19994-201ENSMUST00000217086 586 ntBASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC17.02■□□□□ 0.31
Col16a1Q8BLX7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Gm11628-201ENSMUST00000117568 171 ntBASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Gm43830-201ENSMUST00000198760 1067 ntBASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col16a1Q8BLX7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC17■□□□□ 0.31
Col16a1Q8BLX7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Gm13611-201ENSMUST00000118269 318 ntBASIC17■□□□□ 0.31
Col16a1Q8BLX7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Gm8494-201ENSMUST00000178171 1233 ntBASIC17■□□□□ 0.31
Col16a1Q8BLX7 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC17■□□□□ 0.31
Col16a1Q8BLX7 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC17■□□□□ 0.31
Col16a1Q8BLX7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Mir874-201ENSMUST00000104769 76 ntBASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Gm5070-201ENSMUST00000177599 862 ntBASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Gm10752-201ENSMUST00000218348 729 ntBASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms