Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Gm12490-201ENSMUST00000120255 560 ntBASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Gm6152-201ENSMUST00000151704 340 ntBASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Gm18473-201ENSMUST00000220543 868 ntBASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4bQ8BGE6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4bQ8BGE6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms