Protein–RNA interactions for Protein: Q80TT8

Cul9, Cullin-9, mousemouse

Predictions only

Length 1,865 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul9Q80TT8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Gm7541-201ENSMUST00000118361 535 ntBASIC18.36■□□□□ 0.53
Cul9Q80TT8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul9Q80TT8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Gm44958-201ENSMUST00000203734 736 ntBASIC18.35■□□□□ 0.53
Cul9Q80TT8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Gm10288-201ENSMUST00000084614 537 ntBASIC18.35■□□□□ 0.53
Cul9Q80TT8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Gm4782-201ENSMUST00000168705 2046 ntBASIC18.35■□□□□ 0.53
Cul9Q80TT8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Gm4157-201ENSMUST00000211647 679 ntBASIC18.35■□□□□ 0.53
Cul9Q80TT8 Gm18636-201ENSMUST00000218846 1066 ntBASIC18.35■□□□□ 0.53
Cul9Q80TT8 Mirlet7i-201ENSMUST00000083472 85 ntBASIC18.35■□□□□ 0.53
Cul9Q80TT8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul9Q80TT8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cul9Q80TT8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC18.34■□□□□ 0.53
Cul9Q80TT8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Gm23045-201ENSMUST00000175041 96 ntBASIC18.34■□□□□ 0.53
Cul9Q80TT8 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 AC107638.1-201ENSMUST00000213690 1061 ntBASIC18.34■□□□□ 0.53
Cul9Q80TT8 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul9Q80TT8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC18.33■□□□□ 0.53
Cul9Q80TT8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cul9Q80TT8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC18.33■□□□□ 0.53
Cul9Q80TT8 Gm25545-201ENSMUST00000122673 323 ntBASIC18.33■□□□□ 0.53
Cul9Q80TT8 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC18.33■□□□□ 0.53
Cul9Q80TT8 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cul9Q80TT8 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC18.33■□□□□ 0.53
Cul9Q80TT8 CT571245.2-201ENSMUST00000218421 305 ntBASIC18.33■□□□□ 0.53
Cul9Q80TT8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cul9Q80TT8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cul9Q80TT8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cul9Q80TT8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Gm22133-201ENSMUST00000102082 109 ntBASIC18.33■□□□□ 0.52
Cul9Q80TT8 Gm12579-201ENSMUST00000118040 783 ntBASIC18.33■□□□□ 0.52
Cul9Q80TT8 Gm11451-201ENSMUST00000118946 630 ntBASIC18.33■□□□□ 0.52
Cul9Q80TT8 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC18.33■□□□□ 0.52
Cul9Q80TT8 Mir8115-201ENSMUST00000184992 119 ntBASIC18.33■□□□□ 0.52
Cul9Q80TT8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cul9Q80TT8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Cul9Q80TT8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cul9Q80TT8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cul9Q80TT8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cul9Q80TT8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cul9Q80TT8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms