Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh8Q7TSK3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh8Q7TSK3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh8Q7TSK3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh8Q7TSK3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh8Q7TSK3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh8Q7TSK3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh8Q7TSK3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh8Q7TSK3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh8Q7TSK3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh8Q7TSK3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Gm13369-201ENSMUST00000119442 987 ntBASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Gm45331-201ENSMUST00000209868 554 ntBASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh8Q7TSK3 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Gm1335-201ENSMUST00000121653 386 ntBASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh8Q7TSK3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm5187-201ENSMUST00000117317 991 ntBASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms