Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm13022-201ENSMUST00000121181 285 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm15547-201ENSMUST00000122152 333 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm12363-201ENSMUST00000122250 668 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm27046-201ENSMUST00000182160 463 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.14□□□□□ -0.63
Rif1Q6PR54 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Gm12502-201ENSMUST00000120197 444 ntBASIC11.13□□□□□ -0.63
Rif1Q6PR54 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.13□□□□□ -0.63
Rif1Q6PR54 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.13□□□□□ -0.63
Rif1Q6PR54 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.13□□□□□ -0.63
Rif1Q6PR54 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.13□□□□□ -0.63
Rif1Q6PR54 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.13□□□□□ -0.63
Rif1Q6PR54 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.13□□□□□ -0.63
Rif1Q6PR54 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.13□□□□□ -0.63
Rif1Q6PR54 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Snora73b-201ENSMUST00000083419 205 ntBASIC11.13□□□□□ -0.63
Rif1Q6PR54 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rif1Q6PR54 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms