Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Casc4Q6P2L7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Casc4Q6P2L7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Casc4Q6P2L7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Gm12928-201ENSMUST00000117115 573 ntBASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.4□□□□□ -0.26
Casc4Q6P2L7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Casc4Q6P2L7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.4□□□□□ -0.27
Casc4Q6P2L7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Gm11478-201ENSMUST00000117851 599 ntBASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Gm15806-201ENSMUST00000120696 955 ntBASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Gm2495-201ENSMUST00000191160 466 ntBASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Gm17794-201ENSMUST00000220252 955 ntBASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Gm26315-201ENSMUST00000083890 321 ntBASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Casc4Q6P2L7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Casc4Q6P2L7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Casc4Q6P2L7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Casc4Q6P2L7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms