Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Mir874-201ENSMUST00000104769 76 ntBASIC13.01□□□□□ -0.33
VclQ64727 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.01□□□□□ -0.33
VclQ64727 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.01□□□□□ -0.33
VclQ64727 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VclQ64727 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.01□□□□□ -0.33
VclQ64727 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.01□□□□□ -0.33
VclQ64727 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.01□□□□□ -0.33
VclQ64727 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.01□□□□□ -0.33
VclQ64727 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VclQ64727 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.01□□□□□ -0.33
VclQ64727 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
VclQ64727 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.01□□□□□ -0.33
VclQ64727 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
VclQ64727 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
VclQ64727 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
VclQ64727 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VclQ64727 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13□□□□□ -0.33
VclQ64727 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
VclQ64727 Gm4782-201ENSMUST00000168705 2046 ntBASIC13□□□□□ -0.33
VclQ64727 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Gm5303-201ENSMUST00000117943 1252 ntBASIC13□□□□□ -0.33
VclQ64727 Gm8213-201ENSMUST00000118191 441 ntBASIC13□□□□□ -0.33
VclQ64727 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13□□□□□ -0.33
VclQ64727 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13□□□□□ -0.33
VclQ64727 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13□□□□□ -0.33
VclQ64727 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13□□□□□ -0.33
VclQ64727 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13□□□□□ -0.33
VclQ64727 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VclQ64727 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VclQ64727 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.99□□□□□ -0.33
VclQ64727 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.99□□□□□ -0.33
VclQ64727 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.99□□□□□ -0.33
VclQ64727 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VclQ64727 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.99□□□□□ -0.33
VclQ64727 Gm8652-201ENSMUST00000181363 964 ntBASIC12.99□□□□□ -0.33
VclQ64727 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Gm29649-201ENSMUST00000185649 419 ntBASIC12.99□□□□□ -0.33
VclQ64727 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.99□□□□□ -0.33
VclQ64727 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.99□□□□□ -0.33
VclQ64727 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.99□□□□□ -0.33
VclQ64727 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VclQ64727 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VclQ64727 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms