Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.25■□□□□ 0.03
Scn9aQ62205 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.25■□□□□ 0.03
Scn9aQ62205 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.25■□□□□ 0.03
Scn9aQ62205 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.25■□□□□ 0.03
Scn9aQ62205 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Gm23949-201ENSMUST00000104027 127 ntBASIC15.25■□□□□ 0.03
Scn9aQ62205 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.25■□□□□ 0.03
Scn9aQ62205 Gm11450-201ENSMUST00000121144 333 ntBASIC15.25■□□□□ 0.03
Scn9aQ62205 Gm16296-201ENSMUST00000159905 325 ntBASIC15.25■□□□□ 0.03
Scn9aQ62205 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.25■□□□□ 0.03
Scn9aQ62205 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Scn9aQ62205 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn9aQ62205 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Scn9aQ62205 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn9aQ62205 Gm19931-201ENSMUST00000198920 368 ntBASIC15.24■□□□□ 0.03
Scn9aQ62205 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn9aQ62205 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn9aQ62205 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Scn9aQ62205 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.24■□□□□ 0.03
Scn9aQ62205 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.24■□□□□ 0.03
Scn9aQ62205 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.24■□□□□ 0.03
Scn9aQ62205 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.24■□□□□ 0.03
Scn9aQ62205 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.24■□□□□ 0.03
Scn9aQ62205 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn9aQ62205 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.24■□□□□ 0.03
Scn9aQ62205 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.23■□□□□ 0.03
Scn9aQ62205 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Scn9aQ62205 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Scn9aQ62205 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Scn9aQ62205 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn9aQ62205 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.23■□□□□ 0.03
Scn9aQ62205 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.23■□□□□ 0.03
Scn9aQ62205 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Scn9aQ62205 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.23■□□□□ 0.03
Scn9aQ62205 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Scn9aQ62205 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Scn9aQ62205 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn9aQ62205 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.23■□□□□ 0.03
Scn9aQ62205 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn9aQ62205 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn9aQ62205 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.23■□□□□ 0.03
Scn9aQ62205 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.22■□□□□ 0.03
Scn9aQ62205 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn9aQ62205 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms