Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Foxc1Q61572 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Foxc1Q61572 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Foxc1Q61572 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Foxc1Q61572 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Foxc1Q61572 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Foxc1Q61572 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Foxc1Q61572 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Foxc1Q61572 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC9.92□□□□□ -0.82
Foxc1Q61572 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Foxc1Q61572 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Foxc1Q61572 Gm43056-201ENSMUST00000197865 2791 ntBASIC9.92□□□□□ -0.82
Foxc1Q61572 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm10305-201ENSMUST00000195331 2475 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm37917-201ENSMUST00000194711 392 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm43433-201ENSMUST00000196573 481 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm20177-201ENSMUST00000203705 334 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm45384-201ENSMUST00000210451 277 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm5178-201ENSMUST00000219380 898 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm7441-201ENSMUST00000220697 1074 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 AC118006.2-201ENSMUST00000224167 962 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 CT030704.2-201ENSMUST00000228887 494 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Foxc1Q61572 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Gm42471-201ENSMUST00000201457 1865 ntBASIC9.91□□□□□ -0.82
Foxc1Q61572 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC9.91□□□□□ -0.82
Foxc1Q61572 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Foxc1Q61572 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm42769-201ENSMUST00000198576 1659 ntBASIC9.9□□□□□ -0.82
Foxc1Q61572 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm38102-201ENSMUST00000192791 1935 ntBASIC9.9□□□□□ -0.82
Foxc1Q61572 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.9□□□□□ -0.82
Foxc1Q61572 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Foxc1Q61572 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm12507-201ENSMUST00000119155 415 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms