Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Gm12715-201ENSMUST00000121430 1128 ntBASIC17.11■□□□□ 0.33
Ccne1Q61457 Mir7070-201ENSMUST00000183657 86 ntBASIC17.11■□□□□ 0.33
Ccne1Q61457 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccne1Q61457 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccne1Q61457 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccne1Q61457 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Ccne1Q61457 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccne1Q61457 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ccne1Q61457 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccne1Q61457 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccne1Q61457 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccne1Q61457 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccne1Q61457 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccne1Q61457 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccne1Q61457 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Gm44772-201ENSMUST00000207623 1191 ntBASIC17.1■□□□□ 0.33
Ccne1Q61457 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.1■□□□□ 0.33
Ccne1Q61457 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccne1Q61457 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Ccne1Q61457 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.1■□□□□ 0.33
Ccne1Q61457 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccne1Q61457 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Ccne1Q61457 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 Gm2606-201ENSMUST00000100754 1002 ntBASIC17.09■□□□□ 0.33
Ccne1Q61457 Gm25214-201ENSMUST00000104573 129 ntBASIC17.09■□□□□ 0.33
Ccne1Q61457 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccne1Q61457 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 Gm11531-201ENSMUST00000117614 555 ntBASIC17.09■□□□□ 0.33
Ccne1Q61457 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.09■□□□□ 0.33
Ccne1Q61457 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccne1Q61457 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccne1Q61457 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccne1Q61457 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.09■□□□□ 0.33
Ccne1Q61457 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 Gm7293-201ENSMUST00000216682 1007 ntBASIC17.09■□□□□ 0.33
Ccne1Q61457 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccne1Q61457 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.09■□□□□ 0.33
Ccne1Q61457 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccne1Q61457 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccne1Q61457 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccne1Q61457 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccne1Q61457 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccne1Q61457 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccne1Q61457 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccne1Q61457 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccne1Q61457 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccne1Q61457 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccne1Q61457 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccne1Q61457 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccne1Q61457 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.08■□□□□ 0.33
Ccne1Q61457 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccne1Q61457 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Ccne1Q61457 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.08■□□□□ 0.32
Ccne1Q61457 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccne1Q61457 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Ccne1Q61457 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccne1Q61457 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ccne1Q61457 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ccne1Q61457 Gm8862-201ENSMUST00000198379 1346 ntBASIC17.08■□□□□ 0.32
Ccne1Q61457 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccne1Q61457 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccne1Q61457 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC17.08■□□□□ 0.32
Ccne1Q61457 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccne1Q61457 Mir5132-201ENSMUST00000175166 71 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms