Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.49□□□□□ -0.41
Ripk1Q60855 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.49□□□□□ -0.41
Ripk1Q60855 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.49□□□□□ -0.41
Ripk1Q60855 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ripk1Q60855 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Ripk1Q60855 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ripk1Q60855 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.49□□□□□ -0.41
Ripk1Q60855 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.49□□□□□ -0.41
Ripk1Q60855 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.49□□□□□ -0.41
Ripk1Q60855 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ripk1Q60855 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ripk1Q60855 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.49□□□□□ -0.41
Ripk1Q60855 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ripk1Q60855 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ripk1Q60855 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ripk1Q60855 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.48□□□□□ -0.41
Ripk1Q60855 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.48□□□□□ -0.41
Ripk1Q60855 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Mir874-201ENSMUST00000104769 76 ntBASIC12.48□□□□□ -0.41
Ripk1Q60855 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Ripk1Q60855 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.48□□□□□ -0.41
Ripk1Q60855 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.48□□□□□ -0.41
Ripk1Q60855 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.48□□□□□ -0.41
Ripk1Q60855 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ripk1Q60855 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.48□□□□□ -0.41
Ripk1Q60855 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ripk1Q60855 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ripk1Q60855 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.47□□□□□ -0.41
Ripk1Q60855 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Gm7488-201ENSMUST00000117148 684 ntBASIC12.47□□□□□ -0.41
Ripk1Q60855 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.47□□□□□ -0.41
Ripk1Q60855 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Gm29608-201ENSMUST00000190444 463 ntBASIC12.47□□□□□ -0.41
Ripk1Q60855 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.47□□□□□ -0.41
Ripk1Q60855 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ripk1Q60855 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.47□□□□□ -0.41
Ripk1Q60855 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ripk1Q60855 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ripk1Q60855 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms