Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.74□□□□□ -0.21
Satb1Q60611 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Satb1Q60611 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Satb1Q60611 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Satb1Q60611 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.74□□□□□ -0.21
Satb1Q60611 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.74□□□□□ -0.21
Satb1Q60611 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.74□□□□□ -0.21
Satb1Q60611 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.74□□□□□ -0.21
Satb1Q60611 Gm6621-201ENSMUST00000193251 772 ntBASIC13.74□□□□□ -0.21
Satb1Q60611 Gm38158-201ENSMUST00000194617 339 ntBASIC13.74□□□□□ -0.21
Satb1Q60611 Gm43947-201ENSMUST00000203019 959 ntBASIC13.74□□□□□ -0.21
Satb1Q60611 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.74□□□□□ -0.21
Satb1Q60611 Gm10268-201ENSMUST00000085340 555 ntBASIC13.74□□□□□ -0.21
Satb1Q60611 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.74□□□□□ -0.21
Satb1Q60611 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Matn2-206ENSMUST00000228570 2798 ntBASIC13.74□□□□□ -0.21
Satb1Q60611 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.74□□□□□ -0.21
Satb1Q60611 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Satb1Q60611 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Satb1Q60611 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Satb1Q60611 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.73□□□□□ -0.21
Satb1Q60611 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.73□□□□□ -0.21
Satb1Q60611 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Gm15370-201ENSMUST00000117158 253 ntBASIC13.73□□□□□ -0.21
Satb1Q60611 Gm13786-201ENSMUST00000122371 333 ntBASIC13.73□□□□□ -0.21
Satb1Q60611 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Satb1Q60611 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Satb1Q60611 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Satb1Q60611 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Satb1Q60611 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Satb1Q60611 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Satb1Q60611 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.72□□□□□ -0.21
Satb1Q60611 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Satb1Q60611 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms