Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Gm17330-201ENSMUST00000221047 165 ntBASIC14.07□□□□□ -0.16
Syne3Q4FZC9 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Gm5161-201ENSMUST00000075243 853 ntBASIC14.07□□□□□ -0.16
Syne3Q4FZC9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Gm15371-201ENSMUST00000117057 784 ntBASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Gm23984-201ENSMUST00000157139 203 ntBASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Gm24447-201ENSMUST00000083977 338 ntBASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.06□□□□□ -0.16
Syne3Q4FZC9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Gm15376-201ENSMUST00000122258 783 ntBASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Mir7654-201ENSMUST00000185082 70 ntBASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne3Q4FZC9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms