Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col5a2Q3U962 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.47■□□□□ 0.07
Col5a2Q3U962 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col5a2Q3U962 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col5a2Q3U962 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Gm45598-202ENSMUST00000210719 986 ntBASIC15.46■□□□□ 0.07
Col5a2Q3U962 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.46■□□□□ 0.07
Col5a2Q3U962 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.46■□□□□ 0.07
Col5a2Q3U962 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.46■□□□□ 0.07
Col5a2Q3U962 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col5a2Q3U962 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Col5a2Q3U962 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.46■□□□□ 0.06
Col5a2Q3U962 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.46■□□□□ 0.06
Col5a2Q3U962 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Col5a2Q3U962 Gm23363-201ENSMUST00000175024 79 ntBASIC15.46■□□□□ 0.06
Col5a2Q3U962 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.46■□□□□ 0.06
Col5a2Q3U962 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.46■□□□□ 0.06
Col5a2Q3U962 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Col5a2Q3U962 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.46■□□□□ 0.06
Col5a2Q3U962 Gm45925-201ENSMUST00000218882 744 ntBASIC15.46■□□□□ 0.06
Col5a2Q3U962 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col5a2Q3U962 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.45■□□□□ 0.06
Col5a2Q3U962 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Gm11450-201ENSMUST00000121144 333 ntBASIC15.45■□□□□ 0.06
Col5a2Q3U962 Gm12291-201ENSMUST00000121627 311 ntBASIC15.45■□□□□ 0.06
Col5a2Q3U962 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Gm5616-201ENSMUST00000165252 384 ntBASIC15.45■□□□□ 0.06
Col5a2Q3U962 Gm8741-201ENSMUST00000174736 384 ntBASIC15.45■□□□□ 0.06
Col5a2Q3U962 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Col5a2Q3U962 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.45■□□□□ 0.06
Col5a2Q3U962 Gm10312-201ENSMUST00000078515 489 ntBASIC15.45■□□□□ 0.06
Col5a2Q3U962 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col5a2Q3U962 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.44■□□□□ 0.06
Col5a2Q3U962 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Gm15515-201ENSMUST00000117827 822 ntBASIC15.44■□□□□ 0.06
Col5a2Q3U962 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.44■□□□□ 0.06
Col5a2Q3U962 Gm14665-201ENSMUST00000122294 557 ntBASIC15.44■□□□□ 0.06
Col5a2Q3U962 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms