Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.23□□□□□ -0.45
MitfQ08874 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.23□□□□□ -0.45
MitfQ08874 Gm12428-201ENSMUST00000119844 727 ntBASIC12.23□□□□□ -0.45
MitfQ08874 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MitfQ08874 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MitfQ08874 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MitfQ08874 Gm9719-201ENSMUST00000162765 543 ntBASIC12.23□□□□□ -0.45
MitfQ08874 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Gm43474-201ENSMUST00000196415 774 ntBASIC12.23□□□□□ -0.45
MitfQ08874 Gm43125-201ENSMUST00000201724 730 ntBASIC12.23□□□□□ -0.45
MitfQ08874 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
MitfQ08874 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.23□□□□□ -0.45
MitfQ08874 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MitfQ08874 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MitfQ08874 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.22□□□□□ -0.45
MitfQ08874 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
MitfQ08874 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
MitfQ08874 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
MitfQ08874 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
MitfQ08874 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Mir874-201ENSMUST00000104769 76 ntBASIC12.22□□□□□ -0.45
MitfQ08874 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.22□□□□□ -0.45
MitfQ08874 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
MitfQ08874 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
MitfQ08874 Gm5566-201ENSMUST00000116118 459 ntBASIC12.22□□□□□ -0.45
MitfQ08874 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.22□□□□□ -0.45
MitfQ08874 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.22□□□□□ -0.45
MitfQ08874 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.22□□□□□ -0.45
MitfQ08874 Gm18766-201ENSMUST00000189811 808 ntBASIC12.22□□□□□ -0.45
MitfQ08874 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.22□□□□□ -0.45
MitfQ08874 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.22□□□□□ -0.45
MitfQ08874 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
MitfQ08874 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.22□□□□□ -0.45
MitfQ08874 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MitfQ08874 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.22□□□□□ -0.45
MitfQ08874 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
MitfQ08874 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
MitfQ08874 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MitfQ08874 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.21□□□□□ -0.45
MitfQ08874 Gm13385-201ENSMUST00000121089 220 ntBASIC12.21□□□□□ -0.45
MitfQ08874 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.21□□□□□ -0.45
MitfQ08874 Gm29541-201ENSMUST00000191351 678 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms