Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col6a2Q02788 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Col6a2Q02788 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col6a2Q02788 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col6a2Q02788 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Gm17420-201ENSMUST00000164753 153 ntBASIC13.19□□□□□ -0.3
Col6a2Q02788 Gm5370-201ENSMUST00000187187 574 ntBASIC13.19□□□□□ -0.3
Col6a2Q02788 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Col6a2Q02788 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.19□□□□□ -0.3
Col6a2Q02788 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.19□□□□□ -0.3
Col6a2Q02788 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a2Q02788 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a2Q02788 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Gm13392-201ENSMUST00000117708 150 ntBASIC13.18□□□□□ -0.3
Col6a2Q02788 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Mir1938-201ENSMUST00000158746 100 ntBASIC13.18□□□□□ -0.3
Col6a2Q02788 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Gm27682-201ENSMUST00000183930 110 ntBASIC13.18□□□□□ -0.3
Col6a2Q02788 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Gm10268-201ENSMUST00000085340 555 ntBASIC13.18□□□□□ -0.3
Col6a2Q02788 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.18□□□□□ -0.3
Col6a2Q02788 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms