Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cacna1aP97445 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cacna1aP97445 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cacna1aP97445 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 Gm7857-201ENSMUST00000117957 358 ntBASIC12.21□□□□□ -0.45
Cacna1aP97445 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 Gm28693-202ENSMUST00000190758 331 ntBASIC12.21□□□□□ -0.45
Cacna1aP97445 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.21□□□□□ -0.45
Cacna1aP97445 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.21□□□□□ -0.45
Cacna1aP97445 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cacna1aP97445 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cacna1aP97445 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Cacna1aP97445 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cacna1aP97445 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cacna1aP97445 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cacna1aP97445 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cacna1aP97445 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.21□□□□□ -0.46
Cacna1aP97445 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.21□□□□□ -0.46
Cacna1aP97445 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cacna1aP97445 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cacna1aP97445 Gm8885-201ENSMUST00000189382 598 ntBASIC12.21□□□□□ -0.46
Cacna1aP97445 Gm44069-201ENSMUST00000204898 506 ntBASIC12.21□□□□□ -0.46
Cacna1aP97445 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.21□□□□□ -0.46
Cacna1aP97445 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.21□□□□□ -0.46
Cacna1aP97445 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cacna1aP97445 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cacna1aP97445 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cacna1aP97445 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cacna1aP97445 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cacna1aP97445 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cacna1aP97445 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cacna1aP97445 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cacna1aP97445 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Gm9083-201ENSMUST00000120423 819 ntBASIC12.2□□□□□ -0.46
Cacna1aP97445 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.2□□□□□ -0.46
Cacna1aP97445 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.2□□□□□ -0.46
Cacna1aP97445 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Gm16202-201ENSMUST00000117532 544 ntBASIC12.2□□□□□ -0.46
Cacna1aP97445 Gm14726-201ENSMUST00000120623 896 ntBASIC12.2□□□□□ -0.46
Cacna1aP97445 Gm2231-201ENSMUST00000125661 612 ntBASIC12.2□□□□□ -0.46
Cacna1aP97445 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cacna1aP97445 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1aP97445 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cacna1aP97445 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1aP97445 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1aP97445 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1aP97445 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1aP97445 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1aP97445 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1aP97445 Gm24830-201ENSMUST00000102024 166 ntBASIC12.19□□□□□ -0.46
Cacna1aP97445 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cacna1aP97445 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.19□□□□□ -0.46
Cacna1aP97445 Gm11675-201ENSMUST00000121873 832 ntBASIC12.19□□□□□ -0.46
Cacna1aP97445 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1aP97445 Gm25890-201ENSMUST00000177643 165 ntBASIC12.19□□□□□ -0.46
Cacna1aP97445 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.19□□□□□ -0.46
Cacna1aP97445 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.19□□□□□ -0.46
Cacna1aP97445 Gm22614-201ENSMUST00000178300 165 ntBASIC12.19□□□□□ -0.46
Cacna1aP97445 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1aP97445 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms