Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
PrkdcP97313 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC8.73□□□□□ -1.01
PrkdcP97313 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Mir7677-201ENSMUST00000184226 67 ntBASIC8.73□□□□□ -1.01
PrkdcP97313 Gm2875-201ENSMUST00000211333 360 ntBASIC8.73□□□□□ -1.01
PrkdcP97313 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
PrkdcP97313 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
PrkdcP97313 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC8.72□□□□□ -1.01
PrkdcP97313 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC8.72□□□□□ -1.01
PrkdcP97313 Gm23045-201ENSMUST00000175041 96 ntBASIC8.72□□□□□ -1.01
PrkdcP97313 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC8.72□□□□□ -1.01
PrkdcP97313 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
PrkdcP97313 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
PrkdcP97313 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
PrkdcP97313 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Gm9166-201ENSMUST00000120293 561 ntBASIC8.72□□□□□ -1.01
PrkdcP97313 Gm5555-201ENSMUST00000120352 1111 ntBASIC8.72□□□□□ -1.01
PrkdcP97313 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
PrkdcP97313 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC8.72□□□□□ -1.01
PrkdcP97313 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC8.72□□□□□ -1.01
PrkdcP97313 Gm7904-201ENSMUST00000217049 465 ntBASIC8.72□□□□□ -1.01
PrkdcP97313 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC8.72□□□□□ -1.01
PrkdcP97313 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
PrkdcP97313 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
PrkdcP97313 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
PrkdcP97313 Gm22133-201ENSMUST00000102082 109 ntBASIC8.72□□□□□ -1.01
PrkdcP97313 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC8.72□□□□□ -1.01
PrkdcP97313 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
PrkdcP97313 Gm14724-201ENSMUST00000118400 537 ntBASIC8.72□□□□□ -1.01
PrkdcP97313 Gm11956-201ENSMUST00000119525 512 ntBASIC8.72□□□□□ -1.01
PrkdcP97313 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
PrkdcP97313 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
PrkdcP97313 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PrkdcP97313 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC8.72□□□□□ -1.01
PrkdcP97313 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PrkdcP97313 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PrkdcP97313 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC8.71□□□□□ -1.01
PrkdcP97313 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PrkdcP97313 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC8.71□□□□□ -1.01
PrkdcP97313 Gm17877-201ENSMUST00000192578 814 ntBASIC8.71□□□□□ -1.01
PrkdcP97313 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PrkdcP97313 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.01
PrkdcP97313 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.01
PrkdcP97313 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PrkdcP97313 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PrkdcP97313 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.01
PrkdcP97313 Gm44056-201ENSMUST00000204623 1427 ntBASIC8.71□□□□□ -1.01
PrkdcP97313 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PrkdcP97313 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC8.71□□□□□ -1.01
PrkdcP97313 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PrkdcP97313 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC8.71□□□□□ -1.02
PrkdcP97313 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Gm5909-201ENSMUST00000119768 1281 ntBASIC8.71□□□□□ -1.02
PrkdcP97313 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC8.71□□□□□ -1.02
PrkdcP97313 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Gm21092-201ENSMUST00000178995 955 ntBASIC8.71□□□□□ -1.02
PrkdcP97313 Gm42433-201ENSMUST00000196806 940 ntBASIC8.71□□□□□ -1.02
PrkdcP97313 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC8.71□□□□□ -1.02
PrkdcP97313 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
PrkdcP97313 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
PrkdcP97313 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms