Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Pfn1P62962 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pfn1P62962 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.25□□□□□ -0.77
Pfn1P62962 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.25□□□□□ -0.77
Pfn1P62962 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Pfn1P62962 Gm2810-201ENSMUST00000118681 990 ntBASIC10.25□□□□□ -0.77
Pfn1P62962 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.25□□□□□ -0.77
Pfn1P62962 Gm11025-201ENSMUST00000140773 466 ntBASIC10.25□□□□□ -0.77
Pfn1P62962 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.25□□□□□ -0.77
Pfn1P62962 Gm9727-201ENSMUST00000161387 555 ntBASIC10.25□□□□□ -0.77
Pfn1P62962 Mir8117-201ENSMUST00000184773 107 ntBASIC10.25□□□□□ -0.77
Pfn1P62962 Gm29741-201ENSMUST00000192667 421 ntBASIC10.25□□□□□ -0.77
Pfn1P62962 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.25□□□□□ -0.77
Pfn1P62962 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.25□□□□□ -0.77
Pfn1P62962 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.25□□□□□ -0.77
Pfn1P62962 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.25□□□□□ -0.77
Pfn1P62962 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pfn1P62962 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pfn1P62962 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pfn1P62962 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 BC001981-202ENSMUST00000191393 1545 ntBASIC10.24□□□□□ -0.77
Pfn1P62962 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.24□□□□□ -0.77
Pfn1P62962 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Pfn1P62962 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.24□□□□□ -0.77
Pfn1P62962 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.24□□□□□ -0.77
Pfn1P62962 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.24□□□□□ -0.77
Pfn1P62962 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.24□□□□□ -0.77
Pfn1P62962 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.24□□□□□ -0.77
Pfn1P62962 Gm17271-201ENSMUST00000165535 355 ntBASIC10.24□□□□□ -0.77
Pfn1P62962 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.24□□□□□ -0.77
Pfn1P62962 Gm38225-201ENSMUST00000194001 393 ntBASIC10.24□□□□□ -0.77
Pfn1P62962 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.24□□□□□ -0.77
Pfn1P62962 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.24□□□□□ -0.77
Pfn1P62962 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.24□□□□□ -0.77
Pfn1P62962 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Pfn1P62962 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.24□□□□□ -0.77
Pfn1P62962 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pfn1P62962 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.24□□□□□ -0.77
Pfn1P62962 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Pfn1P62962 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pfn1P62962 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfn1P62962 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.23□□□□□ -0.77
Pfn1P62962 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfn1P62962 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfn1P62962 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms