Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Lsm6P62313 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lsm6P62313 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.62□□□□□ -0.55
Lsm6P62313 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.62□□□□□ -0.55
Lsm6P62313 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Lsm6P62313 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Gm5866-201ENSMUST00000177881 973 ntBASIC11.62□□□□□ -0.55
Lsm6P62313 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Lsm6P62313 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.62□□□□□ -0.55
Lsm6P62313 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.62□□□□□ -0.55
Lsm6P62313 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.62□□□□□ -0.55
Lsm6P62313 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Lsm6P62313 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Lsm6P62313 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lsm6P62313 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lsm6P62313 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm6P62313 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Lsm6P62313 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lsm6P62313 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lsm6P62313 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.61□□□□□ -0.55
Lsm6P62313 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Lsm6P62313 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lsm6P62313 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.61□□□□□ -0.55
Lsm6P62313 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.61□□□□□ -0.55
Lsm6P62313 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.61□□□□□ -0.55
Lsm6P62313 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Gm2423-201ENSMUST00000074863 733 ntBASIC11.61□□□□□ -0.55
Lsm6P62313 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lsm6P62313 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm6P62313 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lsm6P62313 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm6P62313 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm6P62313 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
Lsm6P62313 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm6P62313 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm6P62313 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm6P62313 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm6P62313 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm6P62313 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Lsm6P62313 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm6P62313 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm6P62313 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms