Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cks1bP61025 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Gm37133-201ENSMUST00000192705 1922 ntBASIC9.46□□□□□ -0.9
Cks1bP61025 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Cks1bP61025 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Cks1bP61025 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cks1bP61025 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cks1bP61025 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cks1bP61025 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cks1bP61025 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cks1bP61025 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Cks1bP61025 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.45□□□□□ -0.9
Cks1bP61025 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cks1bP61025 Gm10275-202ENSMUST00000168697 495 ntBASIC9.45□□□□□ -0.9
Cks1bP61025 Gm27301-201ENSMUST00000184012 127 ntBASIC9.45□□□□□ -0.9
Cks1bP61025 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.45□□□□□ -0.9
Cks1bP61025 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.45□□□□□ -0.9
Cks1bP61025 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.45□□□□□ -0.9
Cks1bP61025 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Cks1bP61025 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Gm10275-201ENSMUST00000092620 635 ntBASIC9.45□□□□□ -0.9
Cks1bP61025 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Cks1bP61025 Gm9109-201ENSMUST00000120254 1405 ntBASIC9.45□□□□□ -0.9
Cks1bP61025 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
Cks1bP61025 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1bP61025 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cks1bP61025 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.44□□□□□ -0.9
Cks1bP61025 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cks1bP61025 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC9.44□□□□□ -0.9
Cks1bP61025 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC9.44□□□□□ -0.9
Cks1bP61025 Gm11543-201ENSMUST00000120758 370 ntBASIC9.44□□□□□ -0.9
Cks1bP61025 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC9.44□□□□□ -0.9
Cks1bP61025 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1bP61025 Gm27628-201ENSMUST00000184911 107 ntBASIC9.44□□□□□ -0.9
Cks1bP61025 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC9.44□□□□□ -0.9
Cks1bP61025 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.44□□□□□ -0.9
Cks1bP61025 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cks1bP61025 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC9.44□□□□□ -0.9
Cks1bP61025 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms