Protein–RNA interactions for Protein: P56475

Gabrr1, Gamma-aminobutyric acid receptor subunit rho-1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrr1P56475 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.32□□□□□ -0.6
Gabrr1P56475 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.32□□□□□ -0.6
Gabrr1P56475 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.32□□□□□ -0.6
Gabrr1P56475 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.32□□□□□ -0.6
Gabrr1P56475 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabrr1P56475 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.31□□□□□ -0.6
Gabrr1P56475 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.31□□□□□ -0.6
Gabrr1P56475 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Gabrr1P56475 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabrr1P56475 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Gabrr1P56475 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Gabrr1P56475 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Gabrr1P56475 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Gabrr1P56475 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Gabrr1P56475 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Syt7-205ENSMUST00000224135 1557 ntBASIC11.3□□□□□ -0.6
Gabrr1P56475 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.3□□□□□ -0.6
Gabrr1P56475 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.3□□□□□ -0.6
Gabrr1P56475 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gabrr1P56475 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.3□□□□□ -0.6
Gabrr1P56475 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Gabrr1P56475 Gm17837-201ENSMUST00000186435 985 ntBASIC11.3□□□□□ -0.6
Gabrr1P56475 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms