Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.53□□□□□ -0.24
ClgnP52194 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ClgnP52194 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ClgnP52194 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ClgnP52194 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ClgnP52194 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ClgnP52194 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ClgnP52194 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.53□□□□□ -0.24
ClgnP52194 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.53□□□□□ -0.24
ClgnP52194 Mir6977-201ENSMUST00000184960 64 ntBASIC13.53□□□□□ -0.24
ClgnP52194 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ClgnP52194 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.53□□□□□ -0.24
ClgnP52194 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.53□□□□□ -0.24
ClgnP52194 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.53□□□□□ -0.24
ClgnP52194 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Gm24447-201ENSMUST00000083977 338 ntBASIC13.53□□□□□ -0.24
ClgnP52194 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.53□□□□□ -0.24
ClgnP52194 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ClgnP52194 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClgnP52194 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.52□□□□□ -0.24
ClgnP52194 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClgnP52194 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ClgnP52194 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClgnP52194 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClgnP52194 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ClgnP52194 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClgnP52194 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClgnP52194 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.52□□□□□ -0.25
ClgnP52194 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.52□□□□□ -0.25
ClgnP52194 Gm10576-201ENSMUST00000191927 825 ntBASIC13.52□□□□□ -0.25
ClgnP52194 Gm7730-201ENSMUST00000212486 454 ntBASIC13.52□□□□□ -0.25
ClgnP52194 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.52□□□□□ -0.25
ClgnP52194 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ClgnP52194 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.52□□□□□ -0.25
ClgnP52194 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.52□□□□□ -0.25
ClgnP52194 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClgnP52194 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.52□□□□□ -0.25
ClgnP52194 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClgnP52194 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClgnP52194 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClgnP52194 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClgnP52194 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClgnP52194 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClgnP52194 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
ClgnP52194 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.51□□□□□ -0.25
ClgnP52194 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.51□□□□□ -0.25
ClgnP52194 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.51□□□□□ -0.25
ClgnP52194 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.51□□□□□ -0.25
ClgnP52194 Gm5161-201ENSMUST00000075243 853 ntBASIC13.51□□□□□ -0.25
ClgnP52194 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ClgnP52194 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.51□□□□□ -0.25
ClgnP52194 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ClgnP52194 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ClgnP52194 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClgnP52194 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClgnP52194 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClgnP52194 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ClgnP52194 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClgnP52194 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ClgnP52194 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.5□□□□□ -0.25
ClgnP52194 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ClgnP52194 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClgnP52194 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms