Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.67□□□□□ -0.38
Cdh4P39038 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.67□□□□□ -0.38
Cdh4P39038 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdh4P39038 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdh4P39038 Gm27486-201ENSMUST00000184923 80 ntBASIC12.67□□□□□ -0.38
Cdh4P39038 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdh4P39038 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Cdh4P39038 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.67□□□□□ -0.38
Cdh4P39038 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cdh4P39038 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.67□□□□□ -0.38
Cdh4P39038 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.67□□□□□ -0.38
Cdh4P39038 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.67□□□□□ -0.38
Cdh4P39038 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdh4P39038 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdh4P39038 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.66□□□□□ -0.38
Cdh4P39038 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.66□□□□□ -0.38
Cdh4P39038 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.66□□□□□ -0.38
Cdh4P39038 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Cdh4P39038 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.66□□□□□ -0.38
Cdh4P39038 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.66□□□□□ -0.38
Cdh4P39038 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdh4P39038 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdh4P39038 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh4P39038 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.65□□□□□ -0.38
Cdh4P39038 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdh4P39038 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdh4P39038 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdh4P39038 Gm11814-201ENSMUST00000119515 929 ntBASIC12.65□□□□□ -0.38
Cdh4P39038 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.65□□□□□ -0.38
Cdh4P39038 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.65□□□□□ -0.38
Cdh4P39038 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdh4P39038 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.65□□□□□ -0.38
Cdh4P39038 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Cdh4P39038 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.65□□□□□ -0.38
Cdh4P39038 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cdh4P39038 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdh4P39038 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh4P39038 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms