Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BgnP28653 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
BgnP28653 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
BgnP28653 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BgnP28653 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BgnP28653 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BgnP28653 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BgnP28653 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BgnP28653 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BgnP28653 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BgnP28653 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
BgnP28653 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.23□□□□□ -0.45
BgnP28653 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.23□□□□□ -0.45
BgnP28653 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
BgnP28653 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.23□□□□□ -0.45
BgnP28653 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
BgnP28653 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.23□□□□□ -0.45
BgnP28653 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.23□□□□□ -0.45
BgnP28653 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.23□□□□□ -0.45
BgnP28653 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.23□□□□□ -0.45
BgnP28653 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.23□□□□□ -0.45
BgnP28653 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.23□□□□□ -0.45
BgnP28653 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.23□□□□□ -0.45
BgnP28653 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.23□□□□□ -0.45
BgnP28653 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
BgnP28653 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BgnP28653 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.22□□□□□ -0.45
BgnP28653 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
BgnP28653 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.22□□□□□ -0.45
BgnP28653 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
BgnP28653 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
BgnP28653 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
BgnP28653 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
BgnP28653 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
BgnP28653 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.22□□□□□ -0.45
BgnP28653 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.22□□□□□ -0.45
BgnP28653 Gm15770-201ENSMUST00000117498 584 ntBASIC12.22□□□□□ -0.45
BgnP28653 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.22□□□□□ -0.45
BgnP28653 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.22□□□□□ -0.45
BgnP28653 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.22□□□□□ -0.45
BgnP28653 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.22□□□□□ -0.45
BgnP28653 Gm18049-201ENSMUST00000208909 581 ntBASIC12.22□□□□□ -0.45
BgnP28653 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.22□□□□□ -0.45
BgnP28653 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.22□□□□□ -0.45
BgnP28653 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
BgnP28653 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
BgnP28653 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
BgnP28653 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
BgnP28653 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BgnP28653 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BgnP28653 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BgnP28653 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.21□□□□□ -0.45
BgnP28653 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms