Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1bP25119 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Gm14350-201ENSMUST00000116642 640 ntBASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Gm8598-201ENSMUST00000221184 836 ntBASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Gm16372-201ENSMUST00000073088 450 ntBASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1bP25119 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Gm11814-201ENSMUST00000119515 929 ntBASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Gm21156-201ENSMUST00000189693 869 ntBASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf1bP25119 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf1bP25119 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf1bP25119 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf1bP25119 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf1bP25119 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.23□□□□□ -0.45
Tnfrsf1bP25119 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf1bP25119 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf1bP25119 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms