Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.23□□□□□ -0.77
Ccl1P10146 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Ccl1P10146 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.23□□□□□ -0.77
Ccl1P10146 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.23□□□□□ -0.77
Ccl1P10146 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Ccl1P10146 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.23□□□□□ -0.77
Ccl1P10146 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccl1P10146 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Ccl1P10146 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.23□□□□□ -0.77
Ccl1P10146 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.23□□□□□ -0.77
Ccl1P10146 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccl1P10146 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.23□□□□□ -0.77
Ccl1P10146 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccl1P10146 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Ccl1P10146 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Ccl1P10146 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Ccl1P10146 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl1P10146 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Ccl1P10146 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccl1P10146 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Ccl1P10146 Gm18737-201ENSMUST00000173594 937 ntBASIC10.22□□□□□ -0.77
Ccl1P10146 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.22□□□□□ -0.77
Ccl1P10146 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Mir125a-201ENSMUST00000083545 68 ntBASIC10.22□□□□□ -0.77
Ccl1P10146 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ccl1P10146 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.22□□□□□ -0.77
Ccl1P10146 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ccl1P10146 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ccl1P10146 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccl1P10146 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Ccl1P10146 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl1P10146 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ccl1P10146 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.21□□□□□ -0.77
Ccl1P10146 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Ccl1P10146 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Ccl1P10146 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Ccl1P10146 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.77
Ccl1P10146 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.21□□□□□ -0.77
Ccl1P10146 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.21□□□□□ -0.77
Ccl1P10146 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ccl1P10146 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Ccl1P10146 Mir5126-201ENSMUST00000175513 77 ntBASIC10.21□□□□□ -0.77
Ccl1P10146 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms