Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ly6c1P0CW02 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Gm11814-201ENSMUST00000119515 929 ntBASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Gm12752-201ENSMUST00000121657 811 ntBASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Gm8810-201ENSMUST00000172895 754 ntBASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Gm10012-201ENSMUST00000078252 192 ntBASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ly6c1P0CW02 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Grk6-205ENSMUST00000224653 2976 ntBASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gm4984-201ENSMUST00000115987 360 ntBASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gm14350-201ENSMUST00000116642 640 ntBASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gm37017-201ENSMUST00000195266 747 ntBASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gm6091-201ENSMUST00000098307 165 ntBASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ly6c1P0CW02 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms