Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.01□□□□□ -0.33
Hoxa4P06798 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.01□□□□□ -0.33
Hoxa4P06798 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.01□□□□□ -0.33
Hoxa4P06798 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Gm45784-201ENSMUST00000188360 142 ntBASIC13.01□□□□□ -0.33
Hoxa4P06798 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.01□□□□□ -0.33
Hoxa4P06798 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.01□□□□□ -0.33
Hoxa4P06798 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.01□□□□□ -0.33
Hoxa4P06798 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.01□□□□□ -0.33
Hoxa4P06798 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hoxa4P06798 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Hoxa4P06798 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxa4P06798 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13□□□□□ -0.33
Hoxa4P06798 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13□□□□□ -0.33
Hoxa4P06798 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
Hoxa4P06798 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13□□□□□ -0.33
Hoxa4P06798 Gm9299-201ENSMUST00000206392 1140 ntBASIC13□□□□□ -0.33
Hoxa4P06798 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13□□□□□ -0.33
Hoxa4P06798 AC138604.1-201ENSMUST00000226969 739 ntBASIC13□□□□□ -0.33
Hoxa4P06798 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Gm10146-201ENSMUST00000072739 309 ntBASIC13□□□□□ -0.33
Hoxa4P06798 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Gm25857-201ENSMUST00000082788 129 ntBASIC13□□□□□ -0.33
Hoxa4P06798 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hoxa4P06798 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13□□□□□ -0.33
Hoxa4P06798 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Gm43061-201ENSMUST00000198850 2241 ntBASIC13□□□□□ -0.33
Hoxa4P06798 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa4P06798 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hoxa4P06798 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.99□□□□□ -0.33
Hoxa4P06798 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Hoxa4P06798 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Gm14660-201ENSMUST00000119809 575 ntBASIC12.99□□□□□ -0.33
Hoxa4P06798 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.99□□□□□ -0.33
Hoxa4P06798 Mir1982-201ENSMUST00000157368 74 ntBASIC12.99□□□□□ -0.33
Hoxa4P06798 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Gm27682-201ENSMUST00000183930 110 ntBASIC12.99□□□□□ -0.33
Hoxa4P06798 Gm18062-201ENSMUST00000208020 547 ntBASIC12.99□□□□□ -0.33
Hoxa4P06798 Gm18055-201ENSMUST00000208254 547 ntBASIC12.99□□□□□ -0.33
Hoxa4P06798 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxa4P06798 Gm6458-201ENSMUST00000211573 635 ntBASIC12.99□□□□□ -0.33
Hoxa4P06798 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.99□□□□□ -0.33
Hoxa4P06798 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hoxa4P06798 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms