Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.65□□□□□ -0.86
TcraP01849 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.65□□□□□ -0.86
TcraP01849 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.65□□□□□ -0.86
TcraP01849 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.65□□□□□ -0.86
TcraP01849 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TcraP01849 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
TcraP01849 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.65□□□□□ -0.87
TcraP01849 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TcraP01849 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TcraP01849 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.65□□□□□ -0.87
TcraP01849 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC9.65□□□□□ -0.87
TcraP01849 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
TcraP01849 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
TcraP01849 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
TcraP01849 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TcraP01849 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
TcraP01849 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC9.64□□□□□ -0.87
TcraP01849 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.64□□□□□ -0.87
TcraP01849 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.64□□□□□ -0.87
TcraP01849 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.64□□□□□ -0.87
TcraP01849 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.64□□□□□ -0.87
TcraP01849 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Gm15427-201ENSMUST00000117288 531 ntBASIC9.64□□□□□ -0.87
TcraP01849 Gm9385-201ENSMUST00000117563 472 ntBASIC9.64□□□□□ -0.87
TcraP01849 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC9.64□□□□□ -0.87
TcraP01849 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC9.64□□□□□ -0.87
TcraP01849 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.64□□□□□ -0.87
TcraP01849 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC9.64□□□□□ -0.87
TcraP01849 Gm29741-201ENSMUST00000192667 421 ntBASIC9.64□□□□□ -0.87
TcraP01849 Klk2-ps-201ENSMUST00000205342 571 ntBASIC9.64□□□□□ -0.87
TcraP01849 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC9.64□□□□□ -0.87
TcraP01849 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC9.64□□□□□ -0.87
TcraP01849 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
TcraP01849 CT025555.1-201ENSMUST00000225901 1217 ntBASIC9.64□□□□□ -0.87
TcraP01849 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
TcraP01849 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
TcraP01849 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.64□□□□□ -0.87
TcraP01849 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
TcraP01849 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.64□□□□□ -0.87
TcraP01849 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.64□□□□□ -0.87
TcraP01849 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.64□□□□□ -0.87
TcraP01849 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TcraP01849 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TcraP01849 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC9.63□□□□□ -0.87
TcraP01849 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.63□□□□□ -0.87
TcraP01849 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
TcraP01849 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms