Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Casp6O08738 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Casp6O08738 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Casp6O08738 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casp6O08738 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casp6O08738 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Casp6O08738 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casp6O08738 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casp6O08738 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casp6O08738 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Casp6O08738 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Casp6O08738 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Casp6O08738 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Casp6O08738 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Casp6O08738 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.32□□□□□ -0.6
Casp6O08738 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Casp6O08738 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Casp6O08738 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.32□□□□□ -0.6
Casp6O08738 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.32□□□□□ -0.6
Casp6O08738 Gm6447-201ENSMUST00000118905 835 ntBASIC11.32□□□□□ -0.6
Casp6O08738 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.32□□□□□ -0.6
Casp6O08738 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.32□□□□□ -0.6
Casp6O08738 Gm18584-201ENSMUST00000203098 964 ntBASIC11.32□□□□□ -0.6
Casp6O08738 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.32□□□□□ -0.6
Casp6O08738 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.32□□□□□ -0.6
Casp6O08738 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Casp6O08738 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.32□□□□□ -0.6
Casp6O08738 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casp6O08738 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.31□□□□□ -0.6
Casp6O08738 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.31□□□□□ -0.6
Casp6O08738 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Casp6O08738 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Gm13297-201ENSMUST00000120205 934 ntBASIC11.31□□□□□ -0.6
Casp6O08738 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.31□□□□□ -0.6
Casp6O08738 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.31□□□□□ -0.6
Casp6O08738 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.31□□□□□ -0.6
Casp6O08738 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.31□□□□□ -0.6
Casp6O08738 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Casp6O08738 Gm37466-201ENSMUST00000195692 652 ntBASIC11.31□□□□□ -0.6
Casp6O08738 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.31□□□□□ -0.6
Casp6O08738 Gm7046-201ENSMUST00000221351 977 ntBASIC11.31□□□□□ -0.6
Casp6O08738 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Casp6O08738 Gm24526-201ENSMUST00000082921 158 ntBASIC11.31□□□□□ -0.6
Casp6O08738 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Casp6O08738 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.31□□□□□ -0.6
Casp6O08738 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Casp6O08738 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Casp6O08738 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casp6O08738 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms